Most definetly it is messed up...
Thats why I am not sure that my scratches on the plastic to the eject button did anything (hard to see because very dark in there, and I just assumed I had cut a trace).
Well, my own fault, I should have found out more about the stickers, the procedure to take it apart etc, and I should NOT have done this work at 5AM int he morning without sleep. Complete brainfart on my part..
If they dont replace it, and wants me to pay for repairing it, I will ask they send it back, and I will take it apart, repair it myself, and then mod it asap.
UPDATE: They found the xbox to be faulty (my scratches did not cause it) and a new one is shipped to me today.
UPDATE 2013-02-21: Got the new console today, same manufacture date, and seems to be same drive. Not much to say at the moment other than that.